Vanna Lisa Coli

Enseignante-Chercheuse contractuelle, EFELIA – GReNES
Mots-clés: traitement et reconstruction du signal, méthodes d’optimisation, imagerie biomédicale, modélisation
Mathématiques appliquées, Modélisation, Archéologie, Tomographie, Machine Learning, Traitement et reconstruction du signal, Traitement d'image, Néolithique, Céramiques, Problèmes inverses
Keywords: Applied Mathematics, Modeling, Archaeology, Tomography, Machine Learning, Digital signal reconstruction and processing, Image processing, Neolithic, Pottery, Inverse problems

Thèmes de recherche


Mon expertise se positionne à l’interface des Mathématiques appliquées et de l’Archéologie, grâce à mes travaux de développement de méthodes mathématiques pour la modélisation et la reconstruction de signaux et d’images, en particulier sur des problèmes de reconstruction et analyse d’images tomographiques pour des applications biomédicales et archéologiques.

Mes intérêts de recherche principaux portent sur les méthodes de Machine Learning et traitement d'images afin de caractériser des anciens matériaux et systèmes techniques. Mes activités de recherche visent à caractériser les techniques de montage des poteries néolithiques en exploitant les informations contenues dans des images de tomographie à rayons X et sont intégrées au projets IDEX UCA JEDI "Arch-AI-Story" et "ToMaT" .

L’objet principal de mon doctorat a été l’analyse de techniques d’accélération pour des méthodes du premier ordre dans le domaine de l’optimisation nonlinéaire sous contraintes, ainsi que leur impact dans des problèmes de reconstruction du signal pour des applications biomédicales.
Mon travail de thèse de Master a concerné la modélisation et l’émulation avec logiels des nonlinéarités des systèmes audio via un modèle de série de Volterra modifiée.

My expertise lies at the interface of Applied Mathematics and Archaeology, thanks to my work on the development of mathematical methods for signal and image modelling and reconstruction, in particular on tomographic image reconstruction and analysis problems for biomedical and archaeological applications.My main research interests are in Machine Learning and image processing methods to characterise ancient materials and technical systems. My research activities aim at characterizing the mounting techniques of Neolithic pottery by exploiting the information contained in X-ray tomography images and are integrated in the IDEX UCA JEDI projects "Arch-AI-Story" and "ToMaT".
The principal object of my PhD course research was the analysis of acceleration techniques for first–order methods in nonlinear constrained optimization and their impact in signal reconstruction problems arising in biomedical domains.
My Master’s thesis work concerned the modelling and emulation of nonlinearities of audio systems by means of a modified Volterra series.

Participation à projets de recherche (France)



  • "Arch-AI-Story - De l’objet au système : potentiel des mathématiques appliquées et de l’IA pour l’Archéologie et l’Histoire". IDEX UCA JEDI, ANR-15-IDEX-0001. Porteur : I. Théry-Parisot (Université Côte d'Azur, CEPAM)

  • ”Nouvelles méthodes d’analyse par imagerie 3D et Intelligence Artificielle appliquées aux vestiges préhistoriques et protohistoriques”, EUR CREATES et EUR ODYSSEE, Université Côte d’Azur. Porteurs : V. L. Coli et Laura Cassard (Université Côte d'Azur, CEPAM)

  • "Multiscale Tomography : Imaging and Modelling Ancient Materials, Technical Traditions and Transfers - ToMaT". IDEX UCAJEDI, ANR-15-IDEX-0001. Porteur : D. Binder (Université Côte d'Azur, CEPAM)

  • "Résolution des Equations de Maxwell pour un système d’Imagerie Médicale complet- MEDIMAX". ANR-13-MONU-0012. Porteur : Ch. Pichot (Université Côte d'Azur, LEAT).


Parcours


2021 : Post-doctorante sur projet IDEX ”Arch-AI-Story ”
Université Côte d'Azur, CEPAM CNRS UMR7264, INRIA Sophia Antipolis Méditerranée, France
Thèmes de recherche : modélisation, archéologie, Machine Learning, traitement et reconstruction du signal, imagerie

03/2018 - 04/2020 : Post-doctorante sur projet IDEX ”ToMaT
Université Côte d'Azur, CEPAM CNRS UMR7264, INRIA Sophia Antipolis Méditerranée, France
 Thèmes de recherche : traitement et reconstruction du signal, archéologie, imagerie, modélisation

2014-2017 : PhD en Mathématiques
Università degli Studi di Ferrara (en partenariat avec l'Università di Modena e Reggio Emilia), Italie
Titre: “Variable metric forward–backward methods for applications in biomedical imaging”

  • 01-04-2017 : Séjour de recherche
    Université de Nice Sophia Antipolis, Laboratoire Informatique, Signaux et Systèmes (I3S)


2010-2014: Master en Mathématiques
Università di Bologna, Italie
Titre: “Modellazione matematica delle nonlinearità di sistemi acustici mediante serie di Volterra modificate” (Mathematical modelling of audio systems nonlinearities by means of modified Volterra series)

  • 2011- 2012: LLP Erasmus
    Université Paris VII Diderot


2004-2009: Licence en Mathématiques
Università di Bologna, Italie

Publications


Revues scientifiques à comité de lecture - journal articles



  • Artificial Intelligence-Based Low-Terahertz Imaging for Archaeological Shards’ Classification
    F. Zidane, V. L. Coli, J. Lantéri, J. Marot, L. Brochier, D. Binder, C. Migliaccio.
    In IEEE Transactions on Antennas and Propagation, vol. 70, no. 8, pp. 6300-6312, 2022.
    DOI : 10.1109/TAP.2022.3189553, HAL

  • Micro‑computed tomography for discriminating between different forming techniques in ancient pottery : new segmentation method and pore distribution recognition
    V. L. Coli, L. Gomart, D.F. Pisani, S. Cohen, L. Blanc‑Féraud, J. Leblond, D. Binder. Archaeometry, 64(1), 84–99, 2022. DOI : 10.1111/arcm.12693, HAL

  • Old taphonomy issues, new charcoal data for Mesolithic contexts : Impact of fragment size and sampling context on the assemblages of Escabasses cave (SW France)
    A. Henry, V. L. Coli, N. Valdeyron, I. Théry‑Parisot. Journal of Archaeological Science : Reports, 30, p. 102232, 2020. DOI :10.1016/j.jasrep.2020.102232, HAL

  • Detection of Simulated Brain Strokes Using Microwave Tomography
    V. L. Coli, P.‑H. Tournier, V. Dolean, I. E. Kanfoud, C. Pichot, C. Migliaccio, L. Blanc‑Féraud. IEEE Journal of Electromagnetics, RF and Microwaves in Medicine and Biology, 3(4), pp. 254–260, 2019. DOI : 10.1109/JERM.2019.2921076, HAL

  • Reconstruction of 3D X‑rays CT images from reduced sampling by a scaled gradient projection algorithm
    E. Loli Piccolomini, V. L. Coli, E. Morotti, L. Zanni. Computational Optimization and Applications, 71(1), pp. 171–191, 2018. DOI : 10.1007/s10589‑017‑9961‑2

  • Further investigation in the emulation of nonlinear systems with Volterra series
    L. Tronchin,     V. L. Coli. Journal of the Audio Engineering Society, 63(9), pp. 671–683, 2015. DOI : 10.17743/jaes.2015.0065



Actes de conférence avec comité de lecture - conference proceedings



  • Applications of Learning Methods to Imaging Issues in Archaeology, Regarding Ancient Ceramic Manufacturing
    K. Dia, V. L. Coli, L. Blanc‑Féraud, J. Leblond, L. Gomart, D. Binder. In Proceedings of the 2nd International Conference on Deep Learning Theory and Applications (DeLTA2021), pp. 109‑116. DOI : 10.5220/0010519101090116, HAL
    DeLTA 2021 Best Poster Award

  • Sorting of Archaeological Samples in D‑band
    F. Zidane, C. Migliaccio, J. Lantéri, L. Brochier, V. L. Coli, D. Binder, L. Gomart.  IEEE International Symposium on Antennas and Propagation and North American Radio Science Meeting, 5‑10 July 2020. Virtual conference. DOI : 10.1109/IEEE‑CONF35879.2020.9329573

  • Detection of Brain Strokes Using Microwave Tomography
    V. L. Coli, P.‑H. Tournier, V. Dolean, I. E. Kanfoud, C. Pichot, C. Migliaccio, L. Blanc‑Féraud. Book Series : IEEE Antennas and Propagation Society International Symposium, pp : 223–224, 2018. DOI : 10.1109/APUSNCUR‑SINRSM.2018.8609404

  • A fast gradient projection method for 3D limited data tomography
    V. L. Coli, E. Loli Piccolomini, E. Morotti, L. Zanni. Book Series : Journal of Physics : Conference Series, 904, UNSP 012013, 2017. DOI : 10.1088/1742‑6596/904/1/012013

  • Scaled first–order methods for a class of large–scale constrained least squares problems
    V. L. Coli, V. Ruggiero, L. Zanni. In Numerical Computations : Theory and Algorithms (NUMTA‑2016). Book Series : AIP Conference Proceedings, 040002‑1–040002‑4. AIP Publishing, 2016. DOI :10.1063/1.4965314


Actes de conférence sans comité de lecture - conference proceedings



  • Modelling nonlinearities on musical instruments by means of Volterra series
    L. Tronchin, V. L. Coli, F. Gionfalo. Conférence : ”AES Berlin 2017”, 142nd Audio Engineering Society International Convention, Berlin, Allemagne, 2017.

  • Modellazione delle non linearità in acustica musicale ed elettroacustica mediante Kernel di Volterra
    V. L. Coli. Conférence : 43° Convegno Nazionale Associazione Italiana Acustica (AIA), Alghero, Italie, 2016.
    Prix Italo Barducci 2016 pour jeunes chercheurs en Acoustique


Distinctions



  • Prix du meilleur poster
    11èmes Journées scientifiques du GDR 3544 'Sciences du bois', Nice, 2022
    Poster An artificial intelligence approach to classify archaeological wood charcoals: introduction of a case study with southern African Prehistoric charcoals

  • Prix DeLTA 2021 Best Poster Award
    2nd International Conference on Deep Learning Theory and Applications (DeLTA), virtual conference, 2021
    Papier Applications of Learning Methods to imaging issues in Archaeology, regarding ancient ceramic manufacturing

  • Prix ”Italo Barducci 2016” pour jeunes chercheurs en Acoustique.
    Associazione Italiana di Acustica (AIA), Italie, 2016


Communications orales


Sur invitation dans un congrès international



  •  Exploring Tomographic Images of Archaeological Pottery Sherds with Machine Learning Methods
    SIAM Conference on Imaging Science (virtual), 2022.
    Minisymposium "Novel Perspectives in Optimization and Machine Learning for Imaging"

  • Hough Transform and Image Processing : An Application to Neolithic Pottery
    SIAM Conference on Imaging Science IS20 - Virtual Conference. 2020.
    Minisymposium ”Cultural Heritage Imaging Science".
    Covering article

  • Detection of Brain Strokes Using Microwave Tomography
    2018 IEEE-Antennas-and-Propagation-Society International Symposium on Antennas and Propagation / USNC/URSI National Radio Science Meeting. Boston, MA, États-Unis. 2018.
    Special Session ”Emerging Approaches and Future Trends in Electromagnetic Inverse Problems”

  • First-order scaled methods for image reconstruction in X-rays Computed Tomography
    18th French - German - Italian Conference on Optimization - FGI 2017, Paderborn, Allemagne. 2017.
    Minisymposium ”First order methods andapplications”

  • Scaled first–order methods for a class of large–scale constrained least squares problems
    2nd International Conference on Numerical Computations - Theory and Algorithms (NUMTA), Pizzo Calabro, Italie. 2016.
    Special Session ”Numerical and Computational Methods in Data Analysis and Classification”



Sur invitation dans congrès/rencontres nationaux



  • Détection et modélisation des réseaux poreux dans les céramiques néolithiques : perspectives pour l’identification des techniques et des usages
    2ème Journée Matériaux Université Côte d’Azur, IMRA Europe, Sophia Antipolis, France. 2019

  • Modélisation 3D des fabriques et identification des techniques : nouvelles méthodes de segmentation et de reconnaissance de formes
    Séance de la Société Préhistorique Française ”Céramiques imprimées de Méditerranée occidentale : matières premières, productions, usageset transferts”, Nice, France. 2019

  • Detection of Brain Strokes Using Microwave Tomography
    Journées IDEX UCA JEDI ”Environnement, Santé, Citoyen”, Nice, France. 2018

  • Multiscale Tomography - Imaging and Modelling Ancient Materials
    Journées IDEX UCA JEDI”Matière, Lumière, Interactions”, Fréjus, France. 2018



Séminaires invités



  • Micro-computed tomography for the detection of clay fabric microstructures and the study of pottery forming techniques
    Doctoral training week, projet H2020 MSCA-ITN PlaCe, invitée par M. Dikomitou Eliadou (The Cyprus Institute), 4 octobre 2022 (virtual)

  • Multiscale Tomography - Imaging and Modelling Ancient Materials, Technical Traditions and Transfers: first results and open questions
    Séminaire annuel FACTAS, invitée par J.Leblond (INRIA), 11 novémbre 2019, Juan Les Pins, France

  • Premiers résultats avec régularisation TV sur les images de MEDIMAX
    Journées WIMAG du laboratorie LEAT, invitée par C. Migliaccio (LEAT), 3 février 2017, Sophia Antipolis, France


 

Rencontres internationales et nationales



  • Tomographic imaging: two examples of medical and archaeological applications
    1st French-Italian workshop on the Mathematics of Imaging, Vision and their Applications (MIA-MIVA), Sophia Antipolis, 2022

  • Céramiques imprimées de Méditerranée occidentale : apports de la micro-tomographie á la restitution des traditions céramiques en contexte archéologique
    Journée d’échanges ”Applications de la tomographie par rayons X”, Paris, France. 2018

  • Multiscale Tomography - Imaging and Modelling Ancient Materials
    École d’hiver du Workshop : ”The Mathematics of Imaging”, CIRM, Marseille. 2019. Flash presentation, slides



Communications par affiche



  • Co-auteur : An artificial intelligence approach to classify archaeological wood charcoals: introduction of a case study with southern African Prehistoric charcoals.
    11èmes Journées scientifiques du GDR 3544 'Sciences du bois', Nice, 2022
    Prix du meilleur poster

  • Modelling nonlinearities on musical instruments by means of Volterra series
    ”AES Berlin 2017”, 142nd Audio Engineering Society International Convention, Berlin, Allemagne. 2017

  • Co-auteur : Scaled gradient projection methods for X-rays CT image reconstruction from reduced sampling
     Workshop ”Mathematical Methods for Digital Image Analysis and Processing”, Varese, Italie. 2017

  • Variable metric approaches for large-scale constrained least squares problems
     ”OIP2016 - Optimization Techniques for Inverse Problems III”, Modène, Italie. 2016

  • Tomographic microwave imaging for brain stroke detection - Etude de la détection d’AVC par tomographie microonde
     Assemblée Générale GDR Ondes, École Polytechnique Universitaire Polytech’Nice-Sophia, France. 2017

  • Modellazione delle non linearità in acustica musicale ed elettroacustica mediante Kernel di Volterra
     43mo Convegno Nazionale Associazione Italiana Acustica (AIA), Alghero, Italie. 2016


 

Organisation manifestations scientifiques



  • Journée d’étude ”Nouvelles méthodes d’analyse par imagerie 3D et Intelligence Artificielle appliquées aux vestiges préhistoriques et protohistoriques”, Nice, France, 22 octobre 2021. Financement EUR CREATES et EUR ODYSSEE, Université Côte d’Azur.
    Programme et résumés

  • 1er Colloque doctoral ”Préhistoire, Paléoenvironnement et Archéosciences - PPA”, Nice, France, 22 novembre 2019. Programme et résumés


Diffusion de la culture scientifique et médiation



  • Festival des Sciences de Nice 2022
    Animation de l'Atelier Des poteries passées au rayons X

  • Journées Européennes de l’Archéologie Nice 2022
    Animation de l'Espace Ce qui tourne autour de la poterie

  • Fête de la Science Antibes Juan les Pins 2021.
    Animation du stand CNRS Les métiers de la science en Côte d’Azur. Mon portrait Visages de la Science (2019)

  • Nuit Européenne des Chercheurs Côte d’Azur 2020.
    Animation de l’exposition virtuelle Plongez 8000 ans en arrière!

  • Archéologie et mathématiques : des algorithmes pour identifier les gestes des premiers potiers.
    Communication ”C@fé-In” organisée par MASTIC Médiation et Animation scientifiques Inria Sophia Antipolis - Méditerranée, INRIA, 2019. Résumé

  • Archéologie et mathématiques : algorithmes pour l’identification des gestes des premiers potiers.
    Communication à une classe de lycéens dans les événements pour le Forum des Sciences ”80 ans” du CNRS, Centre International Valbonne Sophia Antipolis, Valbonne, 2019

  • Participation à la construction de l’exposition "Comment les sciences explorent les trajectoires de l’Humanité? Il y a 8000 ans, premiers fermiers, potiers et navigateurs de Méditerranée occidentale". Brochure de l’exposition et info


 

Curriculum vitae FR (mars 2022)

Extrait de la production scientifique (HAL)

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